YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6560756, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSSQTSSHN KLIKLPQRFF FLHKQFFLHK QILLFVVVMA PTVKTAAVKT NEGNGVRYRG  60
   61 VRKRPWGRYA AEIRDPFKKS RVWLGTFDTP EEAARAYDKR AIEFRGAKAK TNFPCYNINA 120
  121 HCLSLTQSLS QSSTVESSFP NLNLGSDSVS SRFPFPKIQV KAGMMVFDER SESDSSSVVM 180
  181 DVVRYEGRRV VLDLDLNFPP PPEN

Type	Start	End	Confidence
Signal Peptide	1	45	0.92
N-region	1	36
H-region	37	42
C-region	43	45
Cleavage Site	45	46
Non-Cytoplasmic	46	204	0.99