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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME40_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTKSKHIIL SLTFLLLFLS TVFSSHVTQR FTSSDDITEL VVTALNQTIS NVNLSSSNFS  60
   61 DLLQRLGSNL SHRDLCAFDD CLELLDDTVF DLTTAISKLR SHSPELHNVK MLLSAAMTNT 120
  121 RTCLDGFASS DNDENLNNND NKTYGVAESL KESLFNISSH VSDSLAMLEN IPGHIPGKVK 180
  181 EDVGFPMWVS GSDRNLLQDP VDETKVNLVV AQNGTGNYTT IGEAISAAPN SSETRFVIYI 240
  241 KCGEYFENIE IPREKTMIMF IGDGIGRTVI KANRSYADGW TAFHSATVGV RGSGFIAKDL 300
  301 SFVNYAGPEK HQAVALRSSS DLSAYYRCSF ESYQDTIYVH SHKQFYRECD IYGTVDFIFG 360
  361 DASVVFQNCS LYARRPNPNQ KIIYTAQGRE NSREPTGISI ISSRILAAPD LIPVQANFKA 420
  421 YLGRPWQLYS RTVIMKSFID DLVDPAGWLK WKDDFALETL YYGEYMNEGP GSNMTNRVQW 480
  481 PGFKRIETVE EASQFSVGPF IDGNKWLNST RIPFTLDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle