YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18400874, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.37
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFIGETVDS IKSIKIRQVL TQAITLGMIV TSALIIWKAL ICVTGSESPV VVVLSESMEP  60
   61 GFQRGDILFL RMTDEPIRAG EIVVFSVDGR EIPIVHRAIK VHERGDTKAV DVLTKGDNND 120
  121 IDDIGLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	18	0.89
Transmembrane Helix	19	41	0.83
Non-Cytoplasmic	42	137	0.85
Transmembrane Helix	138	156	0.61
Cytoplasmic	157	180	0.37