YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VDACL_ARATH
Protein type:	Transmembrane
Type Confidence:	0.52
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSERARIST IVGLFANPIL SFSAVFGNDF WRFGFELTLD LVNRIITKAN TVLSLITEDT  60
   61 TTTFSIDKKA SLFTASYYQR LHSKTVCGAE AKYILSDKSN SFSIGKRHLF GDDDLIQALL 120
  121 SVSNGGSMRV LFQHHWTLKS FFTIAGERLL NHSSQRFGLA VEL

Type	Start	End	Confidence
Cytoplasmic	1	7	0.48
Transmembrane Helix	8	28	0.47
Non-Cytoplasmic	29	163	0.95