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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LRKS1_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWQWRRRQW PSPLLLILIV LHLVSSSSAI DFLYNSFSSV TNRTDVILIE DSRVESTVIS  60
   61 LINDSDPLSF GRVFYPQKLT IIPDPTRNPT RLSSFSTSFV FSILPDISTS PGFGLCFVLS 120
  121 NSTSPPNAIS SQYFGLFTNA TVRFNAPLLA VEFDTGRNSE VNDIDDNHVG IDLNNIESTT 180
  181 SVTAGYYDSV NGSFVRFNMR NGNNVRAWID FDGPNFQINV SVAPVGVLRP RRPTLTFRDP 240
  241 VIANYVSADM YAGFSASKTN WNEARRILAW SLSDTGALRE INTTNLPVFF LENSSSSLST 300
  301 GAIAGIVIGC VVFVALIGFG GYLIWKKLMR EEEEEEIEEW ELEFWPHRFS YEELAAATEV 360
  361 FSNDRLLGSG GFGKVYRGIL SNNSEIAVKC VNHDSKQGLR EFMAEISSMG RLQHKNLVQM 420
  421 RGWCRRKNEL MLVYDYMPNG SLNQWIFDNP KEPMPWRRRR QVINDVAEGL NYLHHGWDQV 480
  481 VIHRDIKSSN ILLDSEMRGR LGDFGLAKLY EHGGAPNTTR VVGTLGYLAP ELASASAPTE 540
  541 ASDVYSFGVV VLEVVSGRRP IEYAEEEDMV LVDWVRDLYG GGRVVDAADE RVRSECETME 600
  601 EVELLLKLGL ACCHPDPAKR PNMREIVSLL LGSPQEDLLT GLTPAAAAAD STAAHA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle