YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ADSL5_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCDPIREDGS NKRGAVSKEK RPYIHREWSW ADIIRALTVI NVHFLCLLAP FNYKWEALRF  60
   61 GFVLYALTSL SITFSYHRNL AHRSFKLPKW LEYPLAYFAV FALQGDPLDW VSIHRFHHQF 120
  121 TDSDRDPHSP IEGFWFSHVW WICDTRYIKY KCGGRNNVMD LKQQWFYWFL RMTIGFHVLM 180
  181 FWTVLYLYGG LPYLTCGGGV GGVIGYHVTW LVNSACHIWG SRSWKTKDTS RNVWWLSLFT 240
  241 MGESWHNNHH AFESSARQGL EWWQIDITWY LIRLFEVLGL ATDVKLPSEI QKQKLALTR

Type	Start	End	Confidence
Cytoplasmic	1	30	0.95
Transmembrane Helix	31	51	0.90
Non-Cytoplasmic	52	57	0.79
Transmembrane Helix	58	80	0.86
Cytoplasmic	81	166	0.90
Transmembrane Helix	167	186	0.93
Non-Cytoplasmic	187	193	0.63
Transmembrane Helix	194	217	0.77
Cytoplasmic	218	299	0.75