YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6091754, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIKKLLMIS FSLTSLLFSL LYIIPTTKTL FTSSKIPSLP LESNQNSNST LPCFAYLISA  60
   61 SKGDAGKLKR LLRSLYHRRN HYLIHLDLEA PEEEHLEMIR FVAGEPLFQP EGNVMIVGKP 120
  121 NLVTYRGPTM LATTLHAMAL LLRCCRWDWF INLSASDYPL VTQDDLIYAF SELPRDLNFI 180
  181 QHTSRLGWKM NKRGKPIIID PGLYSLNKSE IWWVSNQRSL PTSFKLFTGS AWTFLSRPFA 240
  241 EYCIIGYDNL PRTLLLYYTN FVSSPEGYFQ TLICNSDEFK NTTVNHDLHY IAWDNPPKQH 300
  301 PKILGTRDYR KMVMSNRPFA RKFKSNDPVL NRIDREILRR KRKLGSKPDL GPGPGARRLK 360
  361 SLLMRLLLRR NFVNRQCR

Type	Start	End	Confidence
Signal Peptide	1	29	0.69
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	378	0.99