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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7452433, gi|1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKDNCNKKS LSEVLDVRQF RHTNSPVFST AIFAVIMLLV VAGTILSNMS LKSTFFWSSP  60
   61 TSENGEEVIG SSKEHYKQRQ DRLASLTSNR IRGFQVDQPF RAVSSDEYFG KREMLAVESV 120
  121 FKAHPQGCLM IVSGSLDSLQ GDSILKPLND RGYKVFAATP DMSLLLENTP AKSWFQEMKS 180
  181 CKRDPGRIPL HQNLSNLARL AFLYKYGGVY LDTDFIVTRS FKGLKNSIGA QTVVEGDSKN 240
  241 WTRLNNAVLI FEKDHPLVYS FIEEFASTFD GNKWGHNGPY LVTRVAQRAR ETIGDNFTVL 300
  301 PPVAFYPFNW LDIPRLFQTP RGSNDSTLLK TDLVKLNRES YGLHLWNKIT RKLKIESPKS 360
  361 TLYDNNLPFK PNVPLPRPYG PMSSSCNINS VVDSEHKEKE LDPLLPPRKA SKNQRIDWFR 420
  421 RKLPELEILK STTKSKSFHT RVLDLYNKNC SAQFFMIWLS PANSFGPREM LAIDTLFTTN 480
  481 PGACLAILSN SLDSPNGYTI LKPLFDQGFN LIAVTIDIPF LVKNTPAEAW LKRLKSGNMD 540
  541 PGSIPLFMNL SDLTRLAVLY KYGGVYLDTD IIFLNDMTGL RNAIGAQSSD PATKRWTRLN 600
  601 NAVMVFDIYH PLMREFLQEY ATTFDGNKWG YNSPYLVSRV IKRLGNKPGY NNLTIFSPDA 660
  661 FYPVNWIKIQ KLFKKPATTR EAKWVEKTVQ DMNKGSYMIH LWNKVTRKIK IEEGSVMHTL 720
  721 VSTHCTVCGN ITNSHI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle