YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PRK3_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAVLFLCFL LICFSFTPSL QNVSESEPLV RFKRSVNITK GDLNSWRTGT DPCNGKWFGI  60
   61 YCQKGQTVSG IHVTRLGLSG TINIEDLKDL PNLRTIRLDN NLLSGPLPPF FKLPGLKSLL 120
  121 LSNNSFSGEI ADDFFKETPQ LKRVFLDNNR LSGKIPASLM QLAGLEELHM QGNQFTGEIP 180
  181 PLTDGNKVLK SLDLSNNDLE GEIPITISDR KNLEMKFEGN QRLCGSPLNI ECDEKPSSTG 240
  241 SGNEKNNTAK AIFMVILFLL IFLFVVAIIT RWKKKRQPEF RMLGKDHLSD QESVEVRVPD 300
  301 SIKKPIDSSK KRSNAEGSSK KGSSHNGKGA GGGPGSGMGD IIMVNSEKGS FGLPDLMKAA 360
  361 AEVLGNGSLG SAYKAVMANG LSVVVKRIRD MNKLAREAFD TEMQRFGKLR HPNVLTPLAY 420
  421 HYRREEKLVV SEYMPKSSLL YVLHGDRGVY HSELTWATRL KIIQGVARGM DFLHEEFASY 480
  481 DLPHGNLKSS NVLLSETYEP LISDYAFLPL LQPNNASQAL FAFKSPEFVQ NQQVSPKSDV 540
  541 YCLGIIVLEV MTGKFPSQYL NTGKGGTDIV EWVQSSIAQH KEEELIDPEI ASNTDSIKQM 600
  601 VELLRIGAAC IASNPNERQN MKEIVRRIER VTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle