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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9280671
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.27
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHDSFCYLI VLRCALRCGI IALMQICALQ KKERRSKMES SDRSSQAKAF DETKTGVKGL  60
   61 VASGIKEIPA MFHTPPDTLT SLKQTAPPSQ QLTIPTVDLK GGSMDLISRR SVVEKIGDAA 120
  121 ERWGFFQVVN HGISVEVMER MKEGIRRFHE QDPEVKKRFY SRDHTRDVLY YSNIDLHTCN 180
  181 KAANWRDTLA CYMAPDPPKL QDLPAVCGEI MMEYSKQLMT LGEFLFELLS EALGLNPNHL 240
  241 KDMGCAKSHI MFGQYYPPCP QPDLTLGISK HTDFSFITIL LQDNIGGLQV IHDQCWVDVS 300
  301 PVPGALVINI GDLLQLISND KFISAEHRVI ANGSSEPRIS MPCFVSTFMK PNPRIYGPIK 360
  361 ELLSEQNPAK YRDLTITEFS NTFRSQTIRI TEIPALFRAT PATLASLKSP PPPKHLTIPT 420
  421 VDLKGASVVE KIGEAAEKWG LFHLVNHGIP VEVLERMIQG IRGFHEQEPE AKKRFYSRDH 480
  481 TRDVLYFSNH DLQNSEAASW RDTLGCYTAP EPPRLEDLPA VCGEIMLEYS KEIMSLGERL 540
  541 FELLSEALGL NSHHLKDMDC AKSQYMVGQH YPPCPQPDLT IGINKHTDIS FLTVLLQDNV 600
  601 GGLQVFHEQY WIDVTPVPGA LVINIGDFLQ VKKIMLLLRS CFISCMIWGL ILLFYCVQLI 660
  661 TNDKFISAEH RVIANGSSEP RTSVAIVFST FMRAYSRVYG PIKDLLSAEN PAKYRDCTLT 720
  721 EFSTIFSSKT LDAPKLHHFK I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle