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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME45_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFQDFDKIQ ERVNAERKRK FRKRIILGVV SVLVVAAAII GGAFAYVTYE NKTQEQGKTT  60
   61 NNKSKDSPTK SESPSPKPPS SAAQTVKAGQ VDKIIQTLCN STLYKPTCQN TLKNETKKDT 120
  121 PQTDPRSLLK SAIVAVNDDL DQVFKRVLSL KTENKDDKDA IAQCKLLVDE AKEELGTSMK 180
  181 RINDSEVNNF AKIVPDLDSW LSAVMSYQET CVDGFEEGKL KTEIRKNFNS SQVLTSNSLA 240
  241 MIKSLDGYLS SVPKVKTRLL LEARSSAKET DHITSWLSNK ERRMLKAVDV KALKPNATVA 300
  301 KDGSGNFTTI NAALKAMPAK YQGRYTIYIK HGIYDESVII DKKKPNVTMV GDGSQKTIVT 360
  361 GNKSHAKKIR TFLTATFVAQ GEGFMAQSMG FRNTAGPEGH QAVAIRVQSD RSVFLNCRFE 420
  421 GYQDTLYAYT HRQYYRSCVI IGTVDFIFGD AAAIFQNCDI FIRKGLPGQK NTVTAQGRVD 480
  481 KFQTTGFVIH NCTVAPNEDL KPVKAQFKSY LGRPWKPHSR TVVMESTIED VIDPVGWLRW 540
  541 QETDFAIDTL SYAEYKNDGP SGATAARVKW PGFRVLNKEE AMKFTVGPFL QGEWIQAIGS 600
  601 PVKLGLYDA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle