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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3080433, gi|7...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLVRTVTIV LFIIAFLQNA AAQKRQQSIV KSRGAVATDD GRCSVIGMRV LREGGNAIDA  60
   61 SVAAALCLGV VSPASSGIGG GAFTVVKIAG GKEIAYDSRE TAPLRATEVK RVLNMYGGNV 120
  121 DLKKKGALSV GVPGEVAGLF TAWKQHGKLP WKRLVTPAEK LAEGFKISKY LYMQMNATRS 180
  181 DILADKGLSD LFVSNGELKK PGTICHNPKL ALTLKLIGEY GPKAFYNGTV GVNLARDIKK 240
  241 SGGIITLKDL QSYRVKIKEP LSADILGYRV LGMPPPSSGG AAMMLVLNIL SQYGIPSGVS 300
  301 GPLGVHRLIE ALKHAFAVRM NLGDPDFTDV TKVVSDMLSP KFAKDLKSKI NDQKTFDPKY 360
  361 YGGMWNQIDD HGTSHLSIID RERNAVSMTS TINGYFGALM LSPSTGIVLN NEMDDFSIPM 420
  421 KSNGNLDVPP PAPANFIRPG KRPLSSMSPT IVLKDGKVKA AVGASGGANI IAGTTEVYLN 480
  481 HFFLKMDPLS SVLAPRIYHQ LIPNRASYEN WTTVFNDHFE IPKATRVVLE KKGHVLSPIA 540
  541 GGTIAQFIVQ ESGENSGGRS ELVAVSDPRK GGFPSGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle