YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9294296
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGLSVEKTG STRSTVFFII FNLSIFSLSI EARSRQQHAS FPPRGWNSYD SFCWTISEAE  60
   61 FLQSAEIVSK RLLPHGYQYV VVDYLWYRKK VEGAYVDSLG FDVIDEWGRL HPDPGRWPSS 120
  121 RGGKGFTEVA EKVHRMGLKF GIHVMGGIST QAYNANSLVM DSVKGGAYEE SGRQWRAKDI 180
  181 GIKERACVWM SHGFMSVNTK LGAGKAFLRS LYRQYAEWGV DFIKHDCVFG TDFNIEEITY 240
  241 VSEVLKELDR PVLYSISPGT SVTPTMAKEV SQLVNMYRIT GDDWDTWKDV TAHFDISRDL 300
  301 SASSMIGARG LQGKSWPDLD MLPLGWLTDQ GSNVGPHRAC NLNLEEQKSQ MTLWSIAKSP 360
  361 LMFGGDVRNL DATTYNLITN PTLLEINSYS SNNKEFPYIT ATRVSRNKHK GYPHHPTGKN 420
  421 ISTKHAFGLT SCKEQKANTW FIVDKNRGQI CWNQHSSEKL EKPFCLYNRK ALLASDKKLK 480
  481 HNQLYQGKLH LHTNDKAQSC LAASSQQKLT SKDYSQGALS PCKLDANQMW ELHSNGTLEN 540
  541 SYSGLCAVLN PVKGLFFSDQ LTSPLFSSTY PFLILGIVTH LAAAEASSNG VRSWIATGRR 600
  601 GEVYVAFFNL NQEKTKISAK ISDIATALRG KKNLVGASCT SHELWSGKDF GPTKDSVSIQ 660
  661 VEPHGPALFV LHCSNA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle