YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15228091, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIILKLILCM RRWDPNGIYI LPDYMMKTVF SSLLGMFSNR QFKLYSKANL SYAEWAQGDI  60
   61 VPTFDEYLEI GGVEVSMYVT VSCSFLGLVQ TARRKSYEWL KSRRPSQ

Type	Start	End	Confidence
Cytoplasmic	1	16	0.65
Transmembrane Helix	17	37	0.62
Non-Cytoplasmic	38	69	0.93
Transmembrane Helix	70	92	0.60
Cytoplasmic	93	107	0.68