YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15237961, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFFRAATHP DDLRRRVPSP AIMVGTNYRD SHEFFDSDTI CISDQYIMES YFTTYTSLDD  60
   61 SEFRNFLLLQ QCSDKVPTQD SNIVPATSFI QHRNITGEGS HRNLITSIKL LLHHSESQFR 120
  121 ELVIVERLPL GVFADPFELQ SLQQRRAFSD VSVFGDTNLE LPSFRSNRSV VEIHVEISSR 180
  181 NYENGEISFK LPLHARYQPL DDSGYSRVEF GEPDLFLCSS HVQNQRRERR RCLVLSIGRS 240
  241 KTETRSVFWD IPAGIRGHTE YVSALTFAAA VFSAFSILVA SVLSSKGESC KNLKQS

Type	Start	End	Confidence
Non-Cytoplasmic	1	260	0.72
Transmembrane Helix	261	284	0.73
Cytoplasmic	285	296	0.54