YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	P2C46_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSTLMKLLS ACLWPSSSSG KSSDSTGKQD GLLWYKDFGQ HLVGEFSMAV VQANNLLEDQ  60
   61 SQVESGPLST LDSGPYGTFI GIYDGHGGPE TSRFVNDHLF QHLKRFAAEQ ASMSVDVIKK 120
  121 AYEATEEGFL GVVTKQWPTK PQIAAVGSCC LVGVICGGML YIANVGDSRA VLGRAMKATG 180
  181 EVIALQLSAE HNVSIESVRQ EMHSLHPDDS HIVMLKHNVW RVKGLIQISR SIGDVYLKKA 240
  241 EFNKEPLYTK YRIREPFKRP ILSGEPTITE HEIQPQDKFL IFASDGLWEQ MSNQEAVDIV 300
  301 QNHPRNGIAR RLVKMALQEA AKKREMRYSD LKKIERGVRR HFHDDITVVI IFLDTNQVSS 360
  361 VKGPPLSIRG GGMTFPKKI

Type	Start	End	Confidence
Signal Peptide	1	20	0.98
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	379	0.82