YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	B3GT5_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHNNKVSKR LTMTWVPLLC ISCFFLGAIF TSKLRSASSD SGSQLILQHR RDQELKIVTQ  60
   61 DYAHEKKKSQ DNDVMEEVLK THKAIESLDK SVSMLQKQLS ATHSPQQIVN VSATNSSTEG 120
  121 NQKNKVFMVI GINTAFSSRK RRDSLRETWM PQGEKLEKLE KEKGIVVKFM IGHSSTPNSM 180
  181 LDKEIDSEDA QYNDFFRLDH VEGYYNLSAK TKSFFSSAVA KWDAEFYVKI DDDVHVNLGT 240
  241 LASTLASHRS KPRVYIGCMK SGPVLTKKTA KYREPEFWKF GEEGNKYFRH ATGQIYAISK 300
  301 DLATYISNNQ PILHKYANED VTLGSWFIGL EVEQIDDRNF CCGTPPDCEM RAEAGEMCVA 360
  361 TFDWKCSGVC RSVDRMWMVH VMCGEGSKAV WDANLKLS

Type	Start	End	Confidence
Signal Peptide	1	31	0.48
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	398	0.99