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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AATP5_ARATH
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLETGAIWGI TGTTVTSFMF FWAIYKQYVP AHFRAYVERY FHKMIGWISY YVDIKFTEYT  60
   61 DEGLKRSQAY DSIRNYLASK STALAKRLKA NETKNSKSLV FSMDDHEEIE DEFEGVKVKW 120
  121 YSNVKVIQPQ SNYGQRSSEE RRHFTLSFHR RHRGMIIETY LDHVLREGKA IGLMNRERKL 180
  181 YTNNSSQEWY PWRSGKWSNV PFHHPATFET LAMDPEKKEG IKKDLIKFSK GKDYYKKVGK 240
  241 PWKRGYLLFG PPGTGKSTMI AAIANFLDYD VYDLELTTVK DNSELKKLLL DTTSKSIIVI 300
  301 EDIDCSLDLT GQRKKKKEED EEEDGEEKKE GEKKPKVDDK QSKVTLSGLL NSIDGLWSAC 360
  361 SGEKIIVFTT NFVDKLDPAL IRRGRMDNHI EMSYCKFEAF KVLAKNYLEI ETHDLYGEIE 420
  421 RKLEETDMSP ADVAETLMPK SDEEDADICI KRLVKTLEEE KEKARKLAEE EEKKKAEKEA 480
  481 KKMKKAEEAE EKKKKTEEDE KKEKVKAKEE NGNVSQQNGN SIDLNKKSDS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle