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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LRK21_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGVLGSVVF WLIIGIHVTF LVFAQEGDHF VYYDFRNADL ELDGMANTNH GPLHLTNNTN  60
   61 TGTGHAFYNI PIKFTASSLS SFSFSTEFVF AIFPLQKSTY GHGMAFVVSP TKDLRSNGSA 120
  121 NSNLGIFNRA NDNKTATHIF AVELDTNQNS ESFDKGGNDV GIDINSIVSV ESADASYFNA 180
  181 RKGKNISLPL ASGKSILVWI DYDGIEKVLN VTLAPVQTPK PDSPYFSSFI KPKVPLLSRS 240
  241 INLSEIFTET MYVGFSGSTG SIKSNQYILG WSFKQGGKAE SLDISRLSNP PPSPKRFPLK 300
  301 EVLGATISTI AFLTLGGIVY LYKKKKYAEV LEQWEKEYSP QRYSFRILYK ATKGFRENQL 360
  361 LGAGGFGKVY KGILPSGTQI AVKRVYHDAE QGMKQYVAEI ASMGRLRHKN LVHLLGYCRR 420
  421 KGELLLVYDY MPNGSLDDYL FHKNKLKDLT WSQRVNIIKG VASALLYLHE EWEQVVLHRD 480
  481 IKASNILLDA DLNGKLGDFG LARFHDRGVN LEATRVVGTI GYMAPELTAM GVTTTCTDVY 540
  541 AFGAFILEVV CGRRPVDPDA PREQVILVKW VASCGKRDAL TDTVDSKLID FKVEEAKLLL 600
  601 KLGMLCSQIN PENRPSMRQI LQYLEGNVSV PAISFGTVAL GIPNISHETV TQMTTTSSSA 660
  661 NFSFEDVTVL FGGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle