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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6692110
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDEDRITLA PTEIYGRSDE EQSGPRIWRR KTEEPPGKCL VYSLTIIVII FALCLILSSI  60
   61 FLRISKPEIE TRSISTRDLR SGGNSTNPYF NATLVSDISI RNSNFGAFEF EDSTLRVVYA 120
  121 DHGVVGETKI EGRRVEAHKT VRITGVVVEI GSFRLLDTKD LDKDLRLGFL ELRSVAEVRG 180
  181 RIKVLGRKRW KFYRYPNLMA SSSSSASRTW RYRVFTSFHG SDVRTSFLSH FRKQFNNNGI 240
  241 TMFDDQRILR GETISPALTQ AIRESRISIV LLSKNYASSG WCLDELLEIL KCKDDMGQIV 300
  301 MTVFYGVDPS DVRKQTGEFG IAFNETCACR TEEERQKWSQ ALNYVGNIAG EHLLNWDNEA 360
  361 KMIEKIARDV SEKLNVTPCR DFDGMVGIEA HLRKIQSLLD LDNDEVKMVA ISGPAGIGKS 420
  421 TIGRALHSLL SNRFHHTCFV DNLRGSHPIG LDEYGLKLRL QEQLLSKILN QDGSRICHLG 480
  481 AIKERLCDMK VFIILDDVND VKQLEALANE SNWFGPGSRI IVTTENKELL KQHGINNTYY 540
  541 VGFPSDEEAI KILCRYAFRQ SSSRHGFKKL TRSVTELCGK LPLGLRVVGS SLHGKNEEEW 600
  601 EYVIRRLETI IDRDIEQVLR VGYESLHENE QSLFLHIAIF FNYEDGDLVK AMLAENDLDI 660
  661 EHELNILVNK SLIYISTDGR IRMHKLLQLV GRQANQREEP WKRRILIDAQ EICHVLENDI 720
  721 GTGAVSGILF DTSGINEVSI SNKALRRMCN LRFLSVYKTK HDGYNRMDIP EDMEFPPRLR 780
  781 LLHWDAYPSK CLPLKFRAEN LVELDMKDSR LEYLWPGTQL LTKLKKLNLE GSYNLKELPD 840
  841 LSNATNLEML DLSVCLALAE LPSSIKNLHK LDVIYMDLCE SLHMIPTNIN LASLETMYMT 900
  901 GCPQLKTFPA FSTKIKRLYL VRTGVEEVPA SITHCSRLLK IDLSGSRNLK SITHLPSSLQ 960
  961 TLDLSSTDIE MIADSCIKDL QRLDHLRLCR CRKLKSLPEL PASLRLLTAE DCESLERVTY1020
 1021 PLNTPTGQLN FTNCLKLGEE AQRVIIQQSL VKHACFPGSV MPSEFNHRAR GNSLKILVKS1080
 1081 SASFAFKACV LISPRQLQCE RNQRRVKIRC RVTDGRGRFV GSKVVSLEHP NHSTGIRTKH1140
 1141 LCFFNGVLTE VSCDALCFVF KISAYNPLDN YEISECAVQI LTNEPERRSC DGGSE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle