YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9828633
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESEKKIAHE IGGVKNDALR FGLHGVKSNI IGSHPLESSY ESEKKSKEAL KRTVIAHAYG  60
   61 TALPLKMDMD RQILSRFQRP PGPIPSSMLG LEVYTGAVDD FGFEDYLNDP RDSETFKPVD 120
  121 FHHGMEVRLG ISKGPIYPSF IRSWGPVCSC GRATTITKAW TNENPGRRFV RCGVHGFINW 180
  181 ADAEKPFGWQ KQSLLEARDE IRQLSECIKA LREQKVSVSV SGSNDHLKKY EEENNKLEEE 240
  241 KKKLVEEKKK LEEEKKKLDE EKKTLAIEVM GANEREKMLR QLIVLSWGCF IVVIGMCLGM 300
  301 GKK

Type	Start	End	Confidence
Non-Cytoplasmic	1	281	0.53
Transmembrane Helix	282	301	0.91
Cytoplasmic	302	303	0.45