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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20196978, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIAFHTFLL QLLLFFFASF AEANDSRKTY LVQMKVGGHR YGSSSGHQEL LGEVLDDDSY  60
   61 KESFTGFSAS LTPRERQKLM SKTTTVSSRR REVLEVSRSR NLKLQTTRSW DFMNLTLKAE 120
  121 RNPENESDLV VAVIDSGIWP YSELFGSDSP PPPGWENKCE NITCNNKIVG ARSYYPKKEK 180
  181 YKWVEEKSVI DVTGHGTHVA SIVAGRKVEK AGYFGLAEGT MRGGVPNAKI AVYKTCWRVI 240
  241 RKNGREDSVC REDNILKAID DAIADKVDII SYSQGFQFTP LQKDKVSWAF LRALKNGILT 300
  301 SAAAGNYANN GKFYYTVANG APWVMTVAAS LKDRIFETKL ELEGEDKPII VYDTINTFET 360
  361 QDSFYPLLNE KAPPESTRKR ELIAERNGYS ILSNYDEKDK GKDVFFEFAQ INLLDEAIKE 420
  421 REKGAIVLGG KSYDFNESIK LQFPIASIFL DEQKKGKLWD YYKKDQSKER LAKIHKTEEI 480
  481 PREEGWVPTV AHLSSRGPNC DSFLANILKP DIAAPGLDII AGWPENVKLS SDRPANDYRH 540
  541 LRFNIMSGTS MACPHATGLA LYLKSFKRWS PSAIKSALMT TSSEMTDDDN EFAYGSGHLN 600
  601 ATKVRDPGLV YETHYQDYID YLCKLGYNTE KLRSHVGSDK IDCSKTEIDH DADLNYPTMT 660
  661 ARVPLPLDTP FKKVFHRTVT NVNDGEFTYL REINYRGDKD FDEIIVDPPQ LKFSELGETK 720
  721 TFTVTVTGIS KRNWNKNRAF MTRNTWLTWT EKDGSRQVRS PIVIYSIKGP KACM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle