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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8778810, gi|2...
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRGKIFVLS LFSIYVLSSA AEKNTSFSAL FAFGDSVLDT GNNNFLLTLL KGNYWPYGLS  60
   61 FDYKFPTGRF GNGRVFTDIV AEGLQIKRLV PAYSKIRRIS SEDLKTGVCF ASGGSGIDDL 120
  121 TSRTLRVLSA GDQVKDFKDY LKKLRRVVKR KKKVKEIVSN AVFLISEGNN DLGYFVAPAL 180
  181 LRLQSTTTYT SKMVVWTRKF LKDLYDLGAR KFAVMGVMPV GCLPIHRASF GGVFGWCNFL 240
  241 LNRITEDFNM KLQKGLTSYA VEYDFKDAKF VYVDIYGTLM DLVKNPMAYG FTEAKKACCC 300
  301 MPNAIIPCFH PDKYVFYDFA HPSQKAYEQK SLPTYLPFTL LQVFHILMGR FHKFPLLGLV 360
  361 LFLGLTGSLI AANEYACSST DIHFTRANFP KGFIFGTATA AFQVEGAVNE GCRGPSMWDV 420
  421 YTKKFPHKCN YHNADVAVDF YHRYKEDIKL MKNLNTDGFR FSIAWPRIFP HGRMEKGISK 480
  481 AGVQYYHDLI DELLANGITP LVTVFHWDTP QDLEDEYGGF LSDRIIKDFT EYANFTFQEY 540
  541 GDKVKHWITF NEPWVFSRAG YDIGNKAPGR CSKYIKEHGE MCHDGRSGHE AYIVSHNMLL 600
  601 AHADAVDAFR KCDKCKGGKI GIAHSPAWFE AHELSDEEHE TPVTGLIDFI LGWHLHPTTY 660
  661 GDYPQSMKDH IGHRLPKFTE AQKEKLKNSA DFVGINYYTS VFALHDEEPD PSQPSWQSDS 720
  721 LVDWEPRYVD KFNAFANKPD VAKVEVYAKG LRSLLKYIKD KYGNPEIMIT ENGYGEDLGE 780
  781 QDTSLVVALS DQHRTYYIQK HLLSLHEAIC DDKVNVTGYF HWSLMDNFEW QDGYKARFGL 840
  841 YYVDYKNNLT RHEKLSAQWY SSFLHDGSKE FEIEHEFEHD EL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle