YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11279333, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGSRVVHQL YFLILTLILP FSAAYQVGVN YGTVANNLPP PHQVVNFIKT KTIINHVKIF  60
   61 DTNHDILAAF SGITGISLTV TVPNSDIISL SKLSNARSWL SDNLLPFLLT TSIRYIAVGN 120
  121 EVVATSDKTL ITHLLPAMET LTLALHLANV SRILVSTPHS LGILSGSSEP PSSGKFRKGY 180
  181 DKAIFSPILD FHNRTKSPFM VNPYPYFGFG PETLNYALFN TNDVVYVDPV TKLNYTNMFD 240
  241 AQLDAVYSAM KRFGYGDVDI VVAETGWPSA GEPNQTGVGL DYAAAYNGNL IKHVNSGKGT 300
  301 PLMPNRVFET YVFSLFNENL KSSVSEQNFG LFKPDFTPVY DVGIMKTNKV YTLQLL

Type	Start	End	Confidence
Signal Peptide	1	24	0.74
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	356	0.87