YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25518458, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKPRSVSPT IFLLVILLVT AGEKTEAKPW WKKVGDSIGN IAGGIRNAVG NYKPVEMGLS  60
   61 LKGGFCLWSG TAQINHEDSS TKPSVKNSPS ATSTRLLLSP PSFTGNRFSF RFRWRRIRRR 120
  121 NRVNRASREF LIAHNLVRAR VGEPPFQWDG RLAAYARTWA NQRVGDCRLV HSNGPYGENI 180
  181 FWAGKNNWSP RDIVNVWADE DKFYDVKGNT CEPQHMCGHY TQIVWRDSTK VGCASVDCSN 240
  241 GGVYAICVYN PPGNYEGENP FGSYDDQIGL ARDDPPAVIG GMA

Type	Start	End	Confidence
Signal Peptide	1	27	0.90
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	283	0.99