YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BAS1B_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASIASSSST TLLSSSRVLL PSKSSLLSPT VSFPRIIPSS SASSSSLCSG FSSLGSLTTN  60
   61 RSASRRNFAV KAQADDLPLV GNKAPDFEAE AVFDQEFIKV KLSEYIGKKY VILFFYPLDF 120
  121 TFVCPTEITA FSDRYEEFEK LNTEVLGVSV DSVFSHLAWV QTDRKSGGLG DLNYPLVSDI 180
  181 TKSISKSFGV LIPDQGIALR GLFIIDKEGV IQHSTINNLG IGRSVDETMR TLQALQYVQE 240
  241 NPDEVCPAGW KPGEKSMKPD PKLSKEYFSA I

Type	Start	End	Confidence
Signal Peptide	1	42	0.82
N-region	1	33
H-region	34	39
C-region	40	42
Cleavage Site	42	43
Non-Cytoplasmic	43	271	0.97