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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PPR88_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRSRSVLLI FRKVLYQSSC LKCLLCANSF STSVSSSLGF RATNKELNQM IRSGYIAEAR  60
   61 DIFEKLEARN TVTWNTMISG YVKRREMNQA RKLFDVMPKR DVVTWNTMIS GYVSCGGIRF 120
  121 LEEARKLFDE MPSRDSFSWN TMISGYAKNR RIGEALLLFE KMPERNAVSW SAMITGFCQN 180
  181 GEVDSAVVLF RKMPVKDSSP LCALVAGLIK NERLSEAAWV LGQYGSLVSG REDLVYAYNT 240
  241 LIVGYGQRGQ VEAARCLFDQ IPDLCGDDHG GEFRERFCKN VVSWNSMIKA YLKVGDVVSA 300
  301 RLLFDQMKDR DTISWNTMID GYVHVSRMED AFALFSEMPN RDAHSWNMMV SGYASVGNVE 360
  361 LARHYFEKTP EKHTVSWNSI IAAYEKNKDY KEAVDLFIRM NIEGEKPDPH TLTSLLSAST 420
  421 GLVNLRLGMQ MHQIVVKTVI PDVPVHNALI TMYSRCGEIM ESRRIFDEMK LKREVITWNA 480
  481 MIGGYAFHGN ASEALNLFGS MKSNGIYPSH ITFVSVLNAC AHAGLVDEAK AQFVSMMSVY 540
  541 KIEPQMEHYS SLVNVTSGQG QFEEAMYIIT SMPFEPDKTV WGALLDACRI YNNVGLAHVA 600
  601 AEAMSRLEPE SSTPYVLLYN MYADMGLWDE ASQVRMNMES KRIKKERGSS WVDSST

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle