YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3702330, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFAWCRSAS KLASVCGRFL SISAVVSLAP PRPMVSRGFL SSTAIDDRQS SNQMFLYMLC  60
   61 SGFIPPKVDD EPTPGINPYT IEDDGGKTVT LTRDYQEEYI VVVAGMPYEE YDGLCFPLTV 120
  121 NFTKKISGLS LEFRCTAFPL NGTSMNGVSV ISRGNYWEDQ RPCDLNVDYR HSYLRMIFDY 180
  181 SPKFALYKYM TTGTRKYVVW LKHLKKFLEE

Type	Start	End	Confidence
Signal Peptide	1	38	0.78
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	210	0.99