YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|222424480, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASTVVTTV THGASSILPS RTALAVSSRR FSSFSPSRLD FSNLRRRVNA PSPRRLVVRA  60
   61 ARTESAGVKL GARAPNFELP EPLTGNLWKL EDFELYPSLL VMFICNHCPF VIHLKKDIVK 120
  121 LCNFYMKKGL AVVAISSNSV VTHPQDGPEF MAEDAKVFKY PFPYLYDESQ EVAREFGAVC 180
  181 TPEFFLYKKD GRRPFELVYH GQFDDSRPSS NSPVTGRDLS LAIDLSLSCQ PIPSNQKPSV 240
  241 GCSIKWHPET KS

Type	Start	End	Confidence
Signal Peptide	1	25	0.75
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	252	0.99