YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25289996, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASIMVLVTV LIILFTGFRI SQATSRTVIF REQSMVDKHE QWMARFSREY RDELEKNMRR  60
   61 DVFKKNLKFI ENFNKKGNKS YKLGVNEFAD WTNEEFLAIH TGLKGLTEVS PSKVVAKTIS 120
  121 SQTWNVSDMV VESKDWRAEG AVTPVKYQGQ CGCCWAFSAV AAVEGVAKIA GGNLVSLSEQ 180
  181 QLLDCDREYD RGCDGGIMSD AFNYVVQNRG IASENDYSYQ GSDGGCRSNA RPAARISGFQ 240
  241 TVPSNNERAL LEAVSRQPVS VSMDATGDGF MHYSGGVYDG PCGTSSNHAV TFVGYGTSQD 300
  301 GTKYWLAKNS WGETWGEKGY IRIRRDVAWP QGMCGVAQYA FYPVA

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	345	0.99