YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CHI62_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLRAMLKN AFILFLFTLT IMAKTVFSQQ CGTTGCAANL CCSRYGYCGT TDAYCGTGCR  60
   61 SGPCSSSTTP IPPTPSGGAG GLNADPRDTI ENVVTPAFFD GIMSKVGNGC PAKGFYTRQA 120
  121 FIAAAQSFDA YKGTVAKREI AAMLAQFSHE SGSFCYKEEI ARGKYCSPST AYPCTPGKDY 180
  181 YGRGPIQITW NYNYGAAGKF LGLPLLTDPD MVARSPQVAF QCAMWFWNLN VRPVLDQGFG 240
  241 ATTRKINGGE CNGRRPAAVQ SRVNYYLEFC RTLGITPGAN LSC

Type	Start	End	Confidence
Signal Peptide	1	28	0.98
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	283	0.99