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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GAUT1_ARATH
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKRGLSGV NRIRGSGGGS RSVLVLLIFF CVFAPLCFFV GRGVYIDSSN DYSIVSVKQN  60
   61 LDWRERLAMQ SVRSLFSKEI LDVIATSTAD LGPLSLDSFK KNNLSASWRG TGVDPSFRHS 120
  121 ENPATPDVKS NNLNEKRDSI SKDSIHQKVE TPTKIHRRQL REKRREMRAN ELVQHNDDTI 180
  181 LKLENAAIER SKSVDSAVLG KYSIWRRENE NDNSDSNIRL MRDQVIMARV YSGIAKLKNK 240
  241 NDLLQELQAR LKDSQRVLGE ATSDADLPRS AHEKLRAMGQ VLAKAKMQLY DCKLVTGKLR 300
  301 AMLQTADEQV RSLKKQSTFL AQLAAKTIPN PIHCLSMRLT IDYYLLSPEK RKFPRSENLE 360
  361 NPNLYHYALF SDNVLAASVV VNSTIMNAKD PSKHVFHLVT DKLNFGAMNM WFLLNPPGKA 420
  421 TIHVENVDEF KWLNSSYCPV LRQLESAAMR EYYFKADHPT SGSSNLKYRN PKYLSMLNHL 480
  481 RFYLPEVYPK LNKILFLDDD IIVQKDLTPL WEVNLNGKVN GAVETCGESF HRFDKYLNFS 540
  541 NPHIARNFNP NACGWAYGMN MFDLKEWKKR DITGIYHKWQ NMNENRTLWK LGTLPPGLIT 600
  601 FYGLTHPLNK AWHVLGLGYN PSIDKKDIEN AAVVHYNGNM KPWLELAMSK YRPYWTKYIK 660
  661 FDHPYLRRCN LHE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle