YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25335893, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLLLIAYA FLYLFLLSHE AEYKINADQS ENSNVGRFGG NYGRLGRLSG SIHHWTGEYR  60
   61 GLEKRPNHSE DNPPSRGWTG EPGLDPRGEG PYVGVTDGRI LKWSGEDLGW IEFAYSSPHR 120
  121 KNCSSHKVEP ACGRPLGLSF EKKSGDLYFC DGYLGVMKVG PKGGLAEKVV DEVEGQKVMF 180
  181 ANQMDIDEEE DAIYFNDSSD TYHFGRDVFY AFLCGEKTGR AIRYDKKTKE AKVIMDRLHF 240
  241 PNGLALSIDG SFVLSCEVPT QLVHRYWAKG PNAGTRDIFA KLPGYADNIR RTETGDFWVA 300
  301 LHSKKTPFSR LSMIHPWVGK FFIKTLKMEL LVFLFEGGKP HAVAVKLSGK TGEIMEILED 360
  361 SEGKNMKFIS EVQERDGRLW FGSVFLPSVW VLDRQ

Type	Start	End	Confidence
Signal Peptide	1	21	0.95
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	395	0.99