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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OE64C_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQAANLWV LLGLGLAGIL MLTKKLKKTV REDFGAFIDK LMLLPPPQPA PPKAPHPLTG  60
   61 LTFAVSDVFD ITGYVTGFGH PDWVRTHEAA SSTSPVVSTL VEGGATCVGK TVVDEFAFSI 120
  121 SGENKHYDSP TNPAAPTRIP GGACSGAAVA VATNAVDFAL GIDTVGGVRV PAGYCGVLGF 180
  181 KSSYGAISNT GIIPVSSSLD SVGWFARDPN TLRRVGHVLL QLPFATQRNP RQIILADDCF 240
  241 QLLKIPVDRI TQVVTKSAEK LFGRQLLKHQ NLETYFETKV PSLKEFARTK AIANTKVSTS 300
  301 RLLANVMQLL QRHEFLQNHG DWINTVKPAI DPVILSQVCE NPELTNEETE NLNAIRNETR 360
  361 VAIGSLLKDD GILVIPTLPA VPPKLGSKEI TSEDYQNRAS SLLSIASISG CCQVTVPLGH 420
  421 HEKCPISVSF IGRHGGDRFL LDTVQTMYPS LQEYSSIVTD PKSSKKAITK EESAEIAKEK 480
  481 GNQAFKEKLW QKAIGLYSEA IKLSDNNATY YSNRAAAYLE LGGFLQAEED CTKAITLDKK 540
  541 NVKAYLRRGT AREMLGDCKG AIEDFRYALV LEPNNKRASL SAERLRKFQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle