YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21618005, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAAAPAVI SWTRSGIVSK SGQTQKKSEM KVSYITGLNS YGGLKAQNNK VVSMGSPLCT  60
   61 EQCFANVVMS LKGRRGNGGA LSTTCNAVGE IFKIAAIMNA LTLVGVAVGF VLLRIETSVE 120
  121 EAEAE

Type	Start	End	Confidence
Cytoplasmic	1	90	0.53
Transmembrane Helix	91	113	0.58
Non-Cytoplasmic	114	125	0.80