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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME46_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSYGRLDEH EQAKLEASRK TKKRIAIIAI SSIVLVCIVV GAVVGTTARD NSKKPPTENN  60
   61 GEPISVSVKA LCDVTLHKEK CFETLGSAPN ASRSSPEELF KYAVKVTITE LSKVLDGFSN 120
  121 GEHMDNATSA AMGACVELIG LAVDQLNETM TSSLKNFDDL RTWLSSVGTY QETCMDALVE 180
  181 ANKPSLTTFG ENHLKNSTEM TSNALAIITW LGKIADTVKF RRRRLLETGN AKVVVADLPM 240
  241 MEGRRLLESG DLKKKATIVV AKDGSGKYRT IGEALAEVEE KNEKPTIIYV KKGVYLENVR 300
  301 VEKTKWNVVM VGDGQSKTIV SAGLNFIDGT PTFETATFAV FGKGFMARDM GFINTAGPAK 360
  361 HQAVALMVSA DLSVFYKCTM DAFQDTMYAH AQRQFYRDCV ILGTVDFIFG NAAVVFQKCE 420
  421 ILPRRPMKGQ QNTITAQGRK DPNQNTGISI HNCTIKPLDN LTDIQTFLGR PWKDFSTTVI 480
  481 MKSFMDKFIN PKGWLPWTGD TAPDTIFYAE YLNSGPGAST KNRVKWQGLK TSLTKKEANK 540
  541 FTVKPFIDGN NWLPATKVPF NSDF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle