YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ERF83_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKGRGSSVV GPALPVTAGG SVKEPRYRGV RKRPWGRFAA EIRDPLKKSR VWLGTFDSAV  60
   61 DAARAYDTAA RNLRGPKAKT NFPIDCSPSS PLQPLTYLHN QNLCSPPVIQ NQIDPFMDHR 120
  121 LYGGGNFQEQ QQQQIISRPA SSSMSSTVKS CSGPRPMEAA AASSSVAKPL HAIKRYPRTP 180
  181 PVAPEDCHSD CDSSSSVIDD GDDIASSSSR RKTPFQFDLN FPPLDGVDLF AGGIDDLHCT 240
  241 DLRL

Type	Start	End	Confidence
Signal Peptide	1	18	0.89
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	244	0.99