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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157817055, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKKRKKDD KKKKEAAQKK ATEQKIKVPE QIKPSVSQPQ PANSDNGTST ATSTNNNAKR  60
   61 ATASNQQPPP PPQQPQQQQQ QQQQQQEQQQ QQQQQQQQQQ QPQALPRYPR EVPPRFRHQE 120
  121 HKQLLKRGQH FPVIAANLGS AVKVLNSQSE SSAVTNQQPQ NNGEVQNSKS QSDINHNTSG 180
  181 SHYENCQRGP VSSTSDCSTS CKNAVNDLLE KEAWPSAPGS DPELASECID ADSASNSESE 240
  241 RNITVMASGN TGGEKDGLRN STGLGPQSKF VVGSSSNNVG HGSSTGPWGF PHGAIISTCQ 300
  301 VSVDAPESKP ESSNSRMNAW GTVSSSSNGG LNPSTLNSAS NHGAWPVLEN NGLALKGPVG 360
  361 SGNSGINIQC STIGQMPNNQ SINSKVSGSS THGTWGSLQE TCEPEVSGSQ KVSFSGQPQN 420
  421 ITTETTGPNN TTNFMTSSLP NSGSVQNNEL PTSNPGAWRV STMNHPQIQA PSVLNGTSLS 480
  481 HLSNGESKTG GSYGTTWGAY GSNYSGDKCA GPNGQANGDT VNATLMQPGI NGPMGTNFQV 540
  541 STNKGGGVWE PGTVNSQSSP WGSGNGANSG GSRRGWGSPA QNTGTSLSSV EWNKLPSNQH 600
  601 SNDSANGNGS KKLTNGWKST EEDDQGSGTS QTNEQNSVWA KAGGTVESDG SAESTGRLEE 660
  661 KVTGESQSRD RRKIDQHTLL QSIVNRTDLD PRVLSNSGWG QTPIKQNTAW DTETSPRGER 720
  721 KTDNGTEAWG SSATQTFNSG ACTDKTSPNS NDTSSVSGWG DPKPTLRWGD SKGSNCQGGW 780
  781 EDDSAATGMI KSNQWGHCKE DKSAWNDSQK NKQGWGDGQK SSQGWSVSAS DNWGESSRSN 840
  841 HWGEANKKSS SGGSDSDRSI SGWNELGKTS SFTWGNNINP NNSSGWDESS KPNSSQGWGD 900
  901 PPKCNQSLGW GDSSKPVSSP DWNKQQDIVG SWGIPPATSK PPGTGWLGGP IPAPAKEEEP 960
  961 TGWEEPSPES IRRKMEIDDG TSAWGDPSKY NYKNVNMWNK NIPEGSSRSD QQAQMHRLLP1020
 1021 AASAISSKET SSGSGWGEPW AEPSTPATTV DNGTSAWGKP IDSGPSWGEP ITAASSASTW1080
 1081 GSNSVGPQSL SKSGPKSMQD GWCGEDTPLP GSRPTGWEEE EDVEIGMWNS SSSQELNSSL1140
 1141 NWPPYTKKMS SKGLSGKKRR RERGMMKGGN KQEDAWINPF VKQFSNISFS RDSPEENVQS1200
 1201 NKMDLSGGML QDKRMEIDKH SLNIGDYNRA VGKGPGSRPQ ISKESSMERN PYFDKDGIVA1260
 1261 DESQNMQFMS SQSMKLPPSN NALPNQALGS IAGLGTQNLN SVRQNGNPSM FGVGNTAAQP1320
 1321 RGMQQPPAQP LSSSQPNLRA QVPPPLLSPQ VPVSLLKYAP NNGGLNPLFG PQQVAMLNQL1380
 1381 SQLNQLSQIS QLQRLLAQQQ RAQSQRSVPS ANRQQQDQQG RPLSVQQQMM QQSRQLDPSL1440
 1441 LVKQQTPPSQ QPLHQPAMKS FLDNVMPHTT PELQKGPSPV NAFSSFPIGL NSNLNVNMDM1500
 1501 NSIKEPQSRL RKWTTVDSMS VNTSLDQNSS KHGAISSGFR LEESPFVPYD FMNSSTSPAS1560
 1561 PPGSIGDGWP RAKSPNGSSS VNWPPEFRPG EPWKGYPNID PETDPYVTPG SVINSLSINT1620
 1621 VREVDHLRDR NSGSSSSLNT TLPSTSAWSS IRASNYNVPL SSTAQSTSAR NSDSKLTWSP1680
 1681 GSVTNTSLAH ELWKVPLPPK NITAPSRPPP GLTGQKPPLS TWDNSPLRVG GGWGNSDARY1740
 1741 TPGSSWGESS SGRITNWLVL KNLTPQIDGS TLRTLCMQHG PLITFHLNLP HGNALVRYSS1800
 1801 KEEVVKAQKS LHMCVLGNTT ILAEFASEEE ISRFFAQSQS LTPSPGWQSL GSSQSRLGSL1860
 1861 DCSHSFSSRT DLNHWNGAGL SGTNCGDLHG TSLWGTPHYS TSLWGPPSSS DPRGISSPSP1920
 1921 INAFLSVDHL AFIFIFFLFF CFFVFFFFCK TVLG

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