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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LAC6_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSAVPSLF RLSFLLFTLQ VMNIGRIGAA TRFYQFKVQT IRLTRLCQTN EIVTVNKKFP  60
   61 GPAISAQEDD RIVIKVINMT PYNTTIHWHG IKQKRSCWYD GPSYITQCPI QSGQSFTYNF 120
  121 KVAQQKGTFL WHAHFSWLRA TVYGPLIVYP KASVPYPFKK PFNEHTILLG EYWLKNVVEL 180
  181 EQHVLESGGP PPPADAFTIN GQPGPNYNCS SKDVYEIQIV PRKIYLLRLI NAGINMETFF 240
  241 TIANHRLTIV EVDGEYTKPY TTERVMLVPG QTMNILVTAD QTVGRYSMAM GPYESAKNVK 300
  301 FQNTSAIANF QYIGALPNNV TVPAKLPIFN DNIAVKTVMD GLRSLNAVDV PRNIDAHLFI 360
  361 TIGLNVNKCN SENPNNKCQG PRKGRLAASM NNISFIEPKV SILEAYYKQL EGYFTLDFPT 420
  421 TPEKAYDFVN GAPNDIANDT QAANGTRAIV FEYGSRIQII FQNTGTLTTE NHPIHLHGHS 480
  481 FYVIGYGTGN YDQQTAKFNL EDPPYLNTIG VPVGGWAAIR FVANNPGLWL LHCHFDIHQT 540
  541 WGMSTMFIVK NGKKVQESLP HPPADLPKC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle