YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MAN3_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKCLCFVVLL AILIAQNSSD LGVKSASSDG FVSRKGVQFI LNGKPFYANG FNAYWLAYEA  60
   61 TDSTTRFKIT YVFQNATIHD LTIVRTWGFR DGGYRALQIA PGVYDEKTFQ GLDFAIAEAK 120
  121 RLGIKMIITF VNNYSDFGGR KQYVDWAKNT GQNVSSDDDF YTNPLVKQYY KNHVKTMVNR 180
  181 VNTFTKVEYK DEPTIMGWEL MNEPQCRADP SGKTLTAWMN EMALYVKSVD SKHLLSTGLE 240
  241 GFYGDSSPQR KTSLNPVAAN VLGTDFIANH KLDAIDFASI HSYPDLWFPN LDEKSRLNLL 300
  301 RKWLECHLED AQNILKKPLI LGEFGKPTNT PGYTQAQRDA VFNATFDTIY ESAEKGGPAA 360
  361 GALFWHVISD GMNNFKDPLS IVLSENSTTV NIITEESRKL GLIRGKGKLS KTKI

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	414	0.99