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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LAC13_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQLRPFFLL LAIFVASLVN AEVHFHEFVI QETPVKRLCR VHNSITVNGQ FPGPTLEVRN  60
   61 GDSLVITAIN KARYNISLHW HGIRQMRNPW ADGPEYITQC PIQPGGSYTY RFTMEDQEGT 120
  121 LWWHAHSRWL RATVYGALII RPPLSSPHYP FPVIPKREIT LLLGEWWDRN PMDVLNLAQF 180
  181 TGAAPNISDA FTINGQPGDL YRCSSQETLR FLVGSGEIVL LRVINSALNQ ELFFGVANHK 240
  241 LTVVAADASY TKPFSTNVIM LGPGQTTDVL LTADQPPAHY YMAAHAYNSA NAAFDNTTTT 300
  301 AILKYKDASC VTLQAKSQAR AIPAQLPGFN DTATAAAFTA QMKSPSKVKV PLEIDENLFF 360
  361 TVGLGLFNCP TPNTQRCQGP NGTRFTASIN NVSFVFPKQN SIMQAYYQGT PTGVFTTDFP 420
  421 PTPPVTFDYT GNVSRGLWQP TRGTKAYKLK FNSQVQIILQ DTSIVTTENH PMHLHGYEFY 480
  481 VVGTGVGNFN PNTDTSSFNL IDPPRRNTIG TPPGGWVAIR FVANNPGAWL MHCHIDSHIF 540
  541 WGLAMVFLVE NGEGHLQSVQ SPPLDLPQC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle