YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25518304, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKPSTSMWA TLQKKRWPLM ILLVLSVSTV GMILVRSTFD SCSVSGKRCS REKEDNSDIK  60
   61 IQSVSGSLNP LEFMKSKLVL LVSHELSLSG GPLLLMELAF LLRGVESEVV WITNQKPVEE 120
  121 DEVIKVLEHK MLDRGVQVIS AKSQKAIDTA LKSDLVVLNT AVAGKWLDAV LKDNVPKVLP 180
  181 KVLWWIHEMR GHYFKPDLVK HLPFVAGAMI DSHATAEYWK NRTHDRLGIK MPKTYVVHLG 240
  241 NSKELMEVAE DSFAKNVLRV SRGKGQDLFL RAFHESLKVI KETKKLEVPT MHAVVVGSDM 300
  301 SAQTKFETEL RNFVQEMKLQ KIVHFVNKTM KVAPYLAAID VLVQNSQARG ECFGRITIEA 360
  361 MAFKLPVLGT AAGGTMEIVV NRTTGLLHNT GKDGVLPLAK NIVKLATNVK MRNTMGKKGY 420
  421 ERVKEMFLEH HMSHRIASVL REVLQHAKIH SRTTNSDH

Type	Start	End	Confidence
Signal Peptide	1	37	0.71
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	458	0.99