YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|5923683
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPQSFDKSV ALFGDSKLVN DSSSIQLTDS VNRTEGRVFY KKPINLFQGK ERNSVIFSTY  60
   61 FSFSMPNEIG DVLAFVMVPS TLDLSLFGKK DYSSSALGFL LEYAKNETVV AFEFDISKRG 120
  121 NRARVLIGRP ESAKIRNLSF VGDLMMDDGG ILSCMIDYEA SSKRMRVRFR KRGSIKMFDP 180
  181 FFSFSVDLEK LWKGGEVMVG LSSANGNSSK PHFLHSWSFE IWHLDPIWVQ PAPLGPNEGL 240
  241 KPDVSTEMEE GRENSECIWR MLGALVLAAV CGAVGAMSAM YLWTICSVRR SMAVVPEECA 300
  301 VSIVVVAVKD GKK

Type	Start	End	Confidence
Non-Cytoplasmic	1	260	0.58
Transmembrane Helix	261	284	0.90
Cytoplasmic	285	313	0.59