YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|124301078, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKISSIHIL FFVFITSGIA DSATVFTLQN SCAYTVWPGT LSGNSITLGD GGFPLTPGAS  60
   61 VQLTAPTGWS GRFWARTGCN FDASGHGTCV TGDCGGVLKC TGGGVPPATL AEFTVGSSNA 120
  121 GMDFYDVSLV DGYNVKMGIK PQGGFGNCKY AGCVSDINEI CPSELRIMDP NSGSVAACKS 180
  181 ACAAFSSPEF CCTGAHATPQ TCSPTYYSSM FKNACPSAYS YAYDDASSTF TCTGSNYLIT 240
  241 FCPTQS

Type	Start	End	Confidence
Signal Peptide	1	22	0.86
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	246	0.94