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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y2685_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPLFLPSSS SALFLLLLLL LTLQTLTSIS LSQPQALRSP EKCGNFSVSF PFQLSSSSSA  60
   61 AAFRLSCENS STLFLHINHQ SYRIIEFFTD GLLVDFPSSP SCRQFNDLRS FPFSANQFFS 120
  121 ISFENVIGLY DCEDSSLCKF GCETNDLFGC DGREEDETSG GDIGCCYPLS DHSAWRVGDD 180
  181 FSVFSRYGCR GFSSWLVPRG TNRGKRGVKL EWAIPRNSPE AICDREARTV NATAIEGSVR 240
  241 CVCRDGFVGD GFLHGTGCLK SCFKDGKELY GDKCKIKKHN GKKLTVLAGV LAPLFILGSL 300
  301 LALFCLLKRP VTSHKDQQFD ISTTTTTTNS VSFRKGYNKT RLFTYRELEE ATKGFQDSQK 360
  361 LTQGKTGTIY SGNLTNGTRV IVHKVLCENQ IEFMEISSQI DHLSAVLHRN LARIIGFCMD 420
  421 IGYNPLVVYE YPVNGSLGDR LRLGLDWCKR VNIVAEVAGL LALLQYENYP PILHTNISSG 480
  481 NIFLDEDFQA KVTGFGLQRK QRIDTSMYDF AVLLLEIVTG LKQREETVTQ ALQKIRSGKL 540
  541 EEIVDPSMYF HEQPVAFREQ IGLVADIATR CVLFGGDGKF GMVDAARELL QIAGNNGGGG 600
  601 CDKKRDGIEE TFSNSSLLQM ISMSPDSIYL PKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle