YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149057560, gi...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTYSKGPDL QSAPLGMDKS AKNLPPPRLC FCPEKGEDMK VGYVPITPQK EGAWVGICRD  60
   61 RRLLAATLLL ALLSSSFTAM SLYQLAVLQA DLMSLRMELQ SYRSSATPAA PGAPGLSAGV 120
  121 KLPTPAAPGP HNSSRGQRNR RAFQGPEETE QDVDLSATPV PSLPGNCHAS HHDENGLNLR 180
  181 TIIQDCLQLI ADSNTPTIRK DSSSEHITGT R

Type	Start	End	Confidence
Cytoplasmic	1	63	0.91
Transmembrane Helix	64	87	0.85
Non-Cytoplasmic	88	211	0.88