YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GDL38_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRASTSSR VSPAFTFLVI FFLLSLTASV EAAGRGVNND KKGGGLGASF IFGDSLVDAG  60
   61 NNNYLSTLSR ANMKPNGIDF KASGGTPTGR FTNGRTIGDI VGEELGSANY AIPFLAPDAK 120
  121 GKALLAGVNY ASGGGGIMNA TGRIFVNRLG MDVQVDFFNT TRKQFDDLLG KEKAKDYIAK 180
  181 KSIFSITIGA NDFLNNYLFP LLSVGTRFTQ TPDDFIGDML EHLRDQLTRL YQLDARKFVI 240
  241 GNVGPIGCIP YQKTINQLDE NECVDLANKL ANQYNVRLKS LLEELNKKLP GAMFVHANVY 300
  301 DLVMELITNY DKYGFKSATK ACCGNGGQYA GIIPCGPTSS LCEERDKYVF WDPYHPSEAA 360
  361 NVIIAKQLLY GDVKVISPVN LSKLRDM

Type	Start	End	Confidence
Signal Peptide	1	32	0.99
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	387	0.99