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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157822865, gi...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVYNPEKCS YDGVEDKRIM GMQLDKASGS LYVAFSTCVI KVPLGRCERH GKCKKTCIAS  60
   61 RDPYCGWVKE TGSCAHLSPL SRLAFEQDIE RGNTDGLGDC HNSFVALNGR ASSLYPSTTT 120
  121 SDSASRDGHE SQGGMLDWND LLKAPGNTDP LGAVSSHNHQ DKKGVIRESY LKSNDQLVPV 180
  181 TLLAIAVILA FVMGAVFSGI IVYCVCDHRR KDVAVVQRKE KELTHSRRGS MSSVTKLSGL 240
  241 FGDSQSKDPK PEAILTPLMH NGKLATPSNT AKMLIKADQH HLDLTALPTP ESTPTLQQKR 300
  301 KPNRGSREWE RNQNLINACT KDMPPMGSPV IPTDLPLRAS PSHIPSVVVL PITQQGYQHE 360
  361 YVDQPKMSEV VAQMALEDQA ATLEYKTIKE HLSSKSPNHG VNLVENLDSL PPKVPQREAS 420
  421 LGPTGASLSQ TGLSKRLEMQ HSSSYGLEYK RSYPTNSLTR SHQATTLKRN NTNSSNSSHL 480
  481 SRNQSLGRGD NPPPAPQRVD SIQVHSPQPS GQAVTVSRQP SLNAYNSLTR SGLKRTPSLK 540
  541 PDVPPKPSFA PLSTSMKPND ACT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle