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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149065272, gi...
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVFRSEEM CLSQVFLQVE AAYCCVAELG ELGLVQFKDL NANVNSFQRK FVNEVRRCES  60
   61 LERILRFLED EMQNEIIIQV PDKDPGTPLP REMITLETTL EKLEGELQEA NQSHQALKKS 120
  121 FLELTELKYL LKKTQDFFEV NLGFTAGVIN RERMASFERL LWRVCRGNVY LKFSEMDTLL 180
  181 EDPVTKEEIK KNIFIIFYQG EQLRLKIKKI CDGFRATIYP CPEHAAERRE MLASVNVRLE 240
  241 DLITVITQTE SHRQRLLQEA ASNWHSWVIK VQKMKAVYHV LNMCNIDVTQ QCIIAEIWFP 300
  301 VADTRHIKKA LEQGMELSGS SMVPIMTEVE TKTDPPTFNR TNKFTAGFQN IVDAYGVGSY 360
  361 REINPAPYTI ITFPFLFAVM FGDCGHGMVM LMAALWMVLN ERHLLAQKST NEMWNIFFNG 420
  421 RYLILLMGIF SIYTGLIYND CFSKSFNIFG SSWSVQPMFR NGTWNAHVVE QNPYLQLDPA 480
  481 IPGVYSGNPY PFGIDPIWNL ASNKLTFLNS YKMKMSVILG IVHMIFGVIL SLFNHIYFRR 540
  541 TLNIILQFIP EMIFMLSLFG YLVFMIIFKW CQYDAHTSQK APSILIHFIG MFLFDYDDSS 600
  601 NAPLYGHQQE VQTFFVIIAL VSVPWMLLIK PFILRAKHQK SQLQSFTIHE DAMEGPSVKK 660
  661 TAGAHGTKEG HEEEFNFGDI FVHQAIHTIE YCLGCISNTA SYLRLWALSL AHAELSEVLW 720
  721 TMVMSIGLRL RGWGGLVGVF IIFAVFAVLT VAILLVMEGL SAFLHALRLH WVEFQNKFYE 780
  781 GAGFKFSPFS FKHVLEGAAE E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle