YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22331213, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKIDPEEEL GRKCCTCFFK FIFTTRLGAL ILWLSLRAKK PKCSIQNFYI PALSKNLSSR  60
   61 DNTTLNFMVR CDNPNKDKGI YYDDVHLTFS TINTTTTNSS DLVLVANYTV PKFYQGHKKK 120
  121 AKKWGQVWPL NNQTVLRAVL PNGSAVFRLD LKTHVRFKIV FWKTKWYRRI KVGADVEVNG 180
  181 DGVKANEKEI KMEKSNFWKT HGYWSEFGFD DDVELTGDGA QKKGSKTKKS DSSLPLRSSF 240
  241 PIFVLMNLLV FFAIR

Type	Start	End	Confidence
Cytoplasmic	1	233	0.51
Transmembrane Helix	234	254	0.67
Non-Cytoplasmic	255	255	0.77